Stem-loop dps-mir-252

Accession

MI0011613

Description

Drosophila pseudoobscura dps-mir-252 precursor miRNA

Gene family

MIPF0000285; mir-252

Sequence

cauuuuggcgguuugcuuucCUAAGUACUAGUGCCGCAGGAGuuagguucguguccgcaauaccUCCUGCUGCCCAAGUGCUUAUUAaagcggcggugguccaacaguga
(((((((((.(.(((((((..((((((((.(.((.(((((((....(((((....)).)))..))))))).)).).))))))))..)))))))...).).)))).)))).

Structure

-    -    - g --u       cC        A U  C       uuag   -  u 
 cauu uugg c g   uugcuuu  UAAGUACU G GC GCAGGAG    guu cg g
 |||| |||| | |   |||||||  |||||||| | || |||||||    ||| ||  
 guga aacc g u   ggcgaaA  AUUCGUGA C CG CGUCCUc    uaa gc u
a    c    u g ggc       UU        A C  U       --ca   c  c 

Annotation confidence Not enough data

Genome context

2: 16736620-16736729 [-]

Mature dps-miR-252-5p

• Accession: MIMAT0012261
• Description: Drosophila pseudoobscura dps-miR-252-5p mature miRNA
• Sequence: 21 - CUAAGUACUAGUGCCGCAGGAG - 42
• Evidence: experimental ; Illumina [1]

Mature dps-miR-252-3p

• Accession: MIMAT0012262
• Description: Drosophila pseudoobscura dps-miR-252-3p mature miRNA
• Sequence: 65 - UCCUGCUGCCCAAGUGCUUAUUA - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9