miRBase entry: dps-mir-2503

Stem-loop dps-mir-2503


Accession
MI0011628
Description
Drosophila pseudoobscura dps-mir-2503 precursor miRNA


Sequence

gcuucucgcucaccaugaauucccacucgaaaauaugauaugcucggcauccuccgggcaggaaggAGGAUGCCGAGCAUAUUAUAUuuucuugugguagauucucagcgcagc
(((...((((......(((((.((((..(((((((((((((((((((((((((((.........)))))))))))))))))))))))))))..))))..)))))..)))).)))

Structure
   ucu    caccau     -c    uc                           ggg 
gcu   cgcu      gaauu  ccac  gaaaauaugauaugcucggcauccucc   c
|||   ||||      |||||  ||||  |||||||||||||||||||||||||||   a
cga   gcga      cuuag  ggug  cuuuUAUAUUAUACGAGCCGUAGGAgg   g
   --c    ----cu     au    uu                           aag 


Annotation confidence Not enough data
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Genome context
2: 17318675-17318788 [-]

Database links

Mature dps-miR-2503

Accession MIMAT0012287
Description Drosophila pseudoobscura dps-miR-2503 mature miRNA
Sequence 67 - AGGAUGCCGAGCAUAUUAUAU - 87
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9