miRBase entry: dps-mir-2508

Stem-loop dps-mir-2508


Accession
MI0011633
Description
Drosophila pseudoobscura dps-mir-2508 precursor miRNA


Sequence

uaccuaaauccgcggggccaucugcuuauuaggggucugcucgggauuaucaaauugguaggUAGAUCUCUAAUAAGCAAAGGUcccgcggauuuacccaaucggua
(((((((((((((((((((...(((((((((((((((((((...((((....))))....)))))))))))))))))))..))))))))))))))).......))))

Structure
    -------               auc                   -cgg    a 
uacc       uaaauccgcggggcc   ugcuuauuaggggucugcu    gauu u
||||       |||||||||||||||   |||||||||||||||||||    ||||  
augg       auuuaggcgcccUGG   ACGAAUAAUCUCUAGAUgg    uuaa c
    cuaaccc               -AA                   augg    a 


Annotation confidence Not enough data
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Genome context
4_group3: 4282795-4282901 [-]

Database links

Mature dps-miR-2508

Accession MIMAT0012292
Description Drosophila pseudoobscura dps-miR-2508 mature miRNA
Sequence 63 - UAGAUCUCUAAUAAGCAAAGGU - 84
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9