miRBase entry: dps-mir-2510

Stem-loop dps-mir-2510

Accession

MI0011636

Description

Drosophila pseudoobscura dps-mir-2510 precursor miRNA

Sequence

guuuugaauucacauucugcauUGAAAAAGCAAUGGAUAAUAGAauguauuugcaaauucuauuguuccuugcuuuuccuaagcgggaugggggagcagucgucgca
............((((((((...(.((((((((.((((((((((((..........)))))))))))).)))))))).)...))))))))((.((....)).))...

Structure

-----guuuugaauuca        auU A        U            guau 
                 cauucugc   G AAAAGCAA GGAUAAUAGAau    u
                 ||||||||   | |||||||| ||||||||||||     
                 guagggcg   c uuuucguu cuuguuaucuua    u
acgcugcugacgagggg        aau c        c            aacg

Annotation confidence Not enough data

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Genome context

4_group4: 3551345-3551451 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from dps-mir-2510

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dps-miR-2510

Accession	MIMAT0012295
Description	Drosophila pseudoobscura dps-miR-2510 mature miRNA
Sequence	23 - UGAAAAAGCAAUGGAUAAUAGA - 44
Evidence	experimental Illumina [1]

References

PubMed ID: 20037610
Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
"Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
"Nat Genet (2010) 42:6-9