miRBase entry: dps-mir-2574b

Stem-loop dps-mir-2574b


Accession
MI0011650
Description
Drosophila pseudoobscura dps-mir-2574b precursor miRNA
Gene family
MIPF0001029; mir-2574


Sequence

aauuucuggucucuccauuugguauugcguuuguuguauacgCAAUACAAAAUGGAGAGACCAGaaau
.(((((((((((((((((((.(((((((((.........))))))))).)))))))))))))))))))

Structure
a                   g         uug 
 auuucuggucucuccauuu guauugcgu   u
 ||||||||||||||||||| |||||||||   u
 uaaaGACCAGAGAGGUAAA CAUAACgca   g
-                   A         uau 


Annotation confidence Not enough data
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Genome context
Unknown_singleton_1172: 1127-1194 [+]

Database links

Mature dps-miR-2574b

Accession MIMAT0012305
Description Drosophila pseudoobscura dps-miR-2574b mature miRNA
Sequence 43 - CAAUACAAAAUGGAGAGACCAG - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9