Stem-loop dps-mir-2528-1

Accession

MI0011662

Description

Drosophila pseudoobscura dps-mir-2528-1 precursor miRNA

Gene family

MIPF0001059; mir-2528

Sequence

acggaauuuuacguauucauccgUUUUGUCUGUAUCGCGAAGUUUGGagucguuuuuguugaagcgauuccacgcauuuuuugagugcugauauuuuggcuugaaaauaagaggccgu
((((..(((((....((((.(((...((((.((((((.(((((.((((((((((((....))))))))))))...))))).))).))).))))...)))..))))..)))))..))))

Structure

    aa     cgua    -u   UUU    U   -   C     --U            u 
acgg  uuuua    uuca  ccg   UGUC GUA UCG GAAGU   UGGagucguuuu g
||||  |||||    ||||  |||   |||| ||| ||| |||||   ||||||||||||  
ugcc  agaau    aagu  ggu   auag cgu agu uuuua   accuuagcgaag u
    gg     --aa    uc   uuu    u   g   u     cgc            u 

Annotation confidence Not enough data

Genome context

2: 24581194-24581311 [+]

Mature dps-miR-2528

• Accession: MIMAT0012306
• Description: Drosophila pseudoobscura dps-miR-2528 mature miRNA
• Sequence: 24 - UUUUGUCUGUAUCGCGAAGUUUGG - 47
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9