miRBase entry: dps-mir-2530

Stem-loop dps-mir-2530


Accession
MI0011664
Description
Drosophila pseudoobscura dps-mir-2530 precursor miRNA


Sequence

gacuaagcucauaaUAUUUCUGGAAGUUACAGUGGGCauauccaagccgcuaaauaugugagcuguuaacgccuuaaagccuuuugagucaagu
.(((..(((((.....(((..((..((((((((..((((((............))))))..)))).)))).))..)))......)))))..)))

Structure
g   aa     -uaaUA   CU  AA    -    GG      ccaag 
 acu  gcuca      UUU  GG  GUUA CAGU  GCauau     c
 |||  |||||      |||  ||  |||| ||||  ||||||      
 uga  ugagu      aaa  cc  caau gucg  uguaua     c
-   ac     uuuccg   uu  -g    u    ag      aaucg 


Annotation confidence Not enough data
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Genome context
3: 11520725-11520818 [+]

Database links

Mature dps-miR-2530

Accession MIMAT0012319
Description Drosophila pseudoobscura dps-miR-2530 mature miRNA
Sequence 15 - UAUUUCUGGAAGUUACAGUGGGC - 37
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9