Stem-loop dps-mir-2534

Accession

MI0011668

Description

Drosophila pseudoobscura dps-mir-2534 precursor miRNA

Sequence

gccggccacuccucccgcgggaucgccuuccaguggcccguggcugccggugcugagcucugccgcugcagggccgGCCGCUUGGGUCUUGCCUGGGGcuccgggcaggaggccugc
((.((((..((((((((.(((.((.((...(((.((((((.(((.((((((.((((((......))).))).)))))).))))))))))))...))))))))))).)))))))).))

Structure

  c    ac    -    c   a  g  uuc   u      u   u      g   -   uc 
gc ggcc  uccu cccg ggg uc cc   cag ggcccg ggc gccggu cug agc  u
|| ||||  |||| |||| ||| || ||   ||| |||||| ||| |||||| ||| |||   
cg ccgg  agga gggc cuc GG GG   GUU CUGGGU UCG CGgccg gac ucg  g
  u    --    c    -   -  -  UCC   -      -   C      g   g   cc 

Annotation confidence Not enough data

Genome context

Unknown_singleton_1773: 896-1012 [-]

Mature dps-miR-2534

• Accession: MIMAT0012323
• Description: Drosophila pseudoobscura dps-miR-2534 mature miRNA
• Sequence: 77 - GCCGCUUGGGUCUUGCCUGGGG - 98
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9