miRBase entry: dps-mir-2537

Stem-loop dps-mir-2537


Accession
MI0011671
Description
Drosophila pseudoobscura dps-mir-2537 precursor miRNA


Sequence

gauuuauguagcUAACGGACAACCGUCUAUAUUGuucuaaaaauccaAAAUAGUCGCUUGUCCUUUAGCcgcugcgaucc
((((...((.(((((.((((((.((.((((.(((...........))).)))).)).)))))).))))).))...)))).

Structure
-    uau  a     C      C  U    A   uucu 
 gauu   gu gcUAA GGACAA CG CUAU UUG    a
 ||||   || ||||| |||||| || |||| |||    a
 cuag   cg CGAUU CCUGUU GC GAUA Aac    a
c    cgu  c     U      C  U    A   cuaa 


Annotation confidence Not enough data
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Genome context
XL_group1e: 8362508-8362587 [-]
Clustered miRNAs
10 other miRNAs are < 10 kb from dps-mir-2537
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dps-miR-2537-5p

Accession MIMAT0012328
Description Drosophila pseudoobscura dps-miR-2537-5p mature miRNA
Sequence 13 - UAACGGACAACCGUCUAUAUUG - 34
Evidence experimental
Illumina [1]

Mature dps-miR-2537-3p

Accession MIMAT0012329
Description Drosophila pseudoobscura dps-miR-2537-3p mature miRNA
Sequence 48 - AAAUAGUCGCUUGUCCUUUAGC - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9