Stem-loop sequence dps-mir-2517a-1

Accession MI0011678
Description Drosophila pseudoobscura miR-2517a-1 stem-loop
Gene family MIPF0000839; mir-2517
Stem-loop 
-ccgggucaaauggucca              -      a c     uauuau 
                  gaguuuucagaucc ucaaau c auaug      u
                  |||||||||||||| |||||| | |||||       
                  uucaaaaguuuagg gguuua g uauac      u
guucacaagaauucacuu              u      - u     uuucag
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Genome context
Coordinates (dpse_r2.26_FB2012_01) Overlapping transcripts
Unknown_singleton_19: 1593-1697 [+]
intergenic
Clustered miRNAs
< 10kb from dps-mir-2517a-1
dps-mir-2543a-1 Unknown_singleton_19: 1437-1552 [+]
dps-mir-2517a-1 Unknown_singleton_19: 1593-1697 [+]

Mature sequence dps-miR-2517a-5p

Accession MIMAT0012342
Previous IDs dps-miR-2517a*
Sequence

23 -  

uucagauccucaaauaccauaug

 - 45

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Evidence experimental; Solexa [1]

Mature sequence dps-miR-2517a-3p

Accession MIMAT0012343
Previous IDs dps-miR-2517a
Sequence

62 -  

uauugauuugguggauuugaaaa

 - 84

Get sequence
Evidence experimental; Solexa [1]

References

1
PMID:20037610 "Evolutionary flux of canonical microRNAs and mirtrons in Drosophila" Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC Nat Genet. 42:6-9(2010).