Stem-loop dps-mir-2551

Accession

MI0011693

Description

Drosophila pseudoobscura dps-mir-2551 precursor miRNA

Sequence

gaaggcuuuuucacauuuauggcgaaauuguAAAAUCAAAUUGGGUUCUUUAUUUguguauuuguauuaaUAAAGCUUGAUUUGAUUUUCAcauugauccaaauuugacaucgagcuuua
.(((((((.....((..(.(((......(((((((((((((((((..(((((((.(((......))).))))))))))))))))))))).))).....))).)..)).....))))))).

Structure

g       uuuca  uu a   cgaaau   -              UU       U   ua 
 aaggcuu     ca  u ugg      ugu AAAAUCAAAUUGGG  CUUUAUU gug  u
 |||||||     ||  | |||      ||| ||||||||||||||  ||||||| |||   
 uuucgag     gu  a acc      acA UUUUAGUUUAGUUC  GAAAUaa uau  u
a       cuaca  uu a   -uaguu   C              --       u   gu 

Annotation confidence Not enough data

Genome context

3: 8678482-8678601 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from dps-mir-2551

Mature dps-miR-2551-5p

• Accession: MIMAT0012362
• Description: Drosophila pseudoobscura dps-miR-2551-5p mature miRNA
• Sequence: 32 - AAAAUCAAAUUGGGUUCUUUAUUU - 55
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2551-3p

• Accession: MIMAT0012363
• Description: Drosophila pseudoobscura dps-miR-2551-3p mature miRNA
• Sequence: 71 - UAAAGCUUGAUUUGAUUUUCA - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9