Stem-loop dps-mir-2560

Accession

MI0011704

Description

Drosophila pseudoobscura dps-mir-2560 precursor miRNA

Sequence

gcaauacauugcuuucagagggcUCGCUCAUCGUUAUUUGAUAGUaaucgcaccugaaauaUGUCAAGUAAUGAUGGGCGUAUAccucccggcaaggucaaacucaauaacauugug
(((((((.(((((....((((...(((((((((((((((((((....((......))....)))))))))))))))))))....))))..))))).)).............))))).

Structure

-     -------------  a     uuca    -gcU                   GUaa  gc 
 gcaau             ac uugcu    gagg    CGCUCAUCGUUAUUUGAUA    uc  a
 |||||             || |||||    ||||    |||||||||||||||||||    ||   
 uguua             ug aacgg    cucc    GCGGGUAGUAAUGAACUGU    ag  c
g     caauaacucaaac  g     --cc    AUAU                   auaa  uc 

Annotation confidence Not enough data

Genome context

4_group3: 4018595-4018711 [+]

Mature dps-miR-2560-5p

• Accession: MIMAT0012382
• Description: Drosophila pseudoobscura dps-miR-2560-5p mature miRNA
• Sequence: 24 - UCGCUCAUCGUUAUUUGAUAGU - 45
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2560-3p

• Accession: MIMAT0012383
• Description: Drosophila pseudoobscura dps-miR-2560-3p mature miRNA
• Sequence: 62 - UGUCAAGUAAUGAUGGGCGUAUA - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9