Stem-loop dps-mir-2566b

Accession

MI0011714

Description

Drosophila pseudoobscura dps-mir-2566b precursor miRNA

Gene family

MIPF0000880; mir-2566

Sequence

auuugcauuuggcUUUAGAAACACAAAGCAUGUGUgguauuucaacucaUACAUAUCUUGUGUUUCUAGAUcaaaugugagua
((((((((((((.(((((((((((((...(((((((((......)).)))))))...))))))))))))))))))))))))).

Structure

-            c             AGC       -  au 
 auuugcauuugg UUUAGAAACACAA   AUGUGUg gu  u
 |||||||||||| |||||||||||||   ||||||| ||   
 ugaguguaaacU AGAUCUUUGUGUU   UACAUac ca  u
a            -             CUA       u  ac 

Annotation confidence Not enough data

Genome context

4_group4: 3553900-3553982 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from dps-mir-2566b

Mature dps-miR-2566b-5p

• Accession: MIMAT0012400
• Description: Drosophila pseudoobscura dps-miR-2566b-5p mature miRNA
• Sequence: 14 - UUUAGAAACACAAAGCAUGUGU - 35
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2566b-3p

• Accession: MIMAT0012401
• Description: Drosophila pseudoobscura dps-miR-2566b-3p mature miRNA
• Sequence: 50 - UACAUAUCUUGUGUUUCUAGAU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9