miRBase entry: dps-mir-2569

Stem-loop dps-mir-2569


Accession
MI0011717
Description
Drosophila pseudoobscura dps-mir-2569 precursor miRNA


Sequence

uguuggacuccaguAUCGUUGCUCGGGUCGUUGUuggaucuauugaaaaguaaaCAACGAACCGAGGAAUUUUACuggcacucaaaaacaa
..((((...((((((..(((.(((((.((((((((.................)))))))).))))).)))..))))))...))))......

Structure
----ug    acu      UC   G     G        ggaucua 
      uugg   ccaguA  GUU CUCGG UCGUUGUu       u
      ||||   ||||||  ||| ||||| ||||||||       u
      aacu   gguCAU  UAA GAGCC AGCAACaa       g
aacaaa    cac      UU   G     A        augaaaa 


Annotation confidence Not enough data
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Genome context
4_group5: 2250946-2251036 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dps-mir-2569
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dps-miR-2569-5p

Accession MIMAT0012406
Description Drosophila pseudoobscura dps-miR-2569-5p mature miRNA
Sequence 15 - AUCGUUGCUCGGGUCGUUGU - 34
Evidence experimental
Illumina [1]

Mature dps-miR-2569-3p

Accession MIMAT0012407
Description Drosophila pseudoobscura dps-miR-2569-3p mature miRNA
Sequence 55 - CAACGAACCGAGGAAUUUUAC - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9