miRBase entry: dps-mir-2576-2

Stem-loop dps-mir-2576-2


Accession
MI0011728
Description
Drosophila pseudoobscura dps-mir-2576-2 precursor miRNA
Gene family
MIPF0001066; mir-2576


Sequence

cggcgaucgggucuCUCGAGUGUGGAGAGCAUGGGAguuggcggacacaugaguguuccaccaugaaccucguccaggccacucucaucucauccgcccgcucgagaggucgcgaucguc
.((((((((.(((((((((((((((((((.((((((((.(((((((....(((.((((......)))))))))))..)))))))))))))).)))))..)))))))))).).))))))))

Structure
c        g -          --     -   C        u   --    acau   u    ca 
 ggcgaucg g ucuCUCGAGU  GUGGA GAG AUGGGAgu ggc  ggac    gag guuc  c
 |||||||| | ||||||||||  ||||| ||| |||||||| |||  ||||    ||| ||||   
 cugcuagc c ggagagcucg  cgccu cuc uacucuca ccg  ccug    cuc caag  c
-        g u          cc     a   -        -   ga    ----   -    ua 


Annotation confidence Not enough data
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Genome context
Unknown_singleton_2064: 6689-6808 [+]

Database links

Mature dps-miR-2576

Accession MIMAT0012422
Description Drosophila pseudoobscura dps-miR-2576 mature miRNA
Sequence 15 - CUCGAGUGUGGAGAGCAUGGGA - 36
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9