Stem-loop dsi-mir-190

Accession

MI0011743

Description

Drosophila simulans dsi-mir-190 precursor miRNA

Gene family

MIPF0000076; mir-190

Sequence

gaugguuccagugAGAUAUGUUUGAUAUUCUUGGUUGuaucauucaaaaguucaCCCAGGAAUCAAACAUAUUAUUAcugugacccucg
((.((((.((((((((((((((((((..((((((.((...............)).)))))))))))))))))).)))))).)))).)).

Structure

-  u    c      -            AU      U  uaucau 
 ga gguu cagugA GAUAUGUUUGAU  UCUUGG UG      u
 || |||| |||||| ||||||||||||  |||||| ||      c
 cu ccag gucAUU UUAUACAAACUA  AGGACC ac      a
g  c    u      A            --      C  uugaaa 

Annotation confidence Not enough data

Genome context

chr3L: 8005923-8006011 [+]

Mature dsi-miR-190-5p

• Accession: MIMAT0012449
• Description: Drosophila simulans dsi-miR-190-5p mature miRNA
• Sequence: 14 - AGAUAUGUUUGAUAUUCUUGGUUG - 37
• Evidence: experimental ; Illumina [1]

Mature dsi-miR-190-3p

• Accession: MIMAT0012450
• Description: Drosophila simulans dsi-miR-190-3p mature miRNA
• Sequence: 55 - CCCAGGAAUCAAACAUAUUAUUA - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9