miRBase entry: dsi-mir-1005

Stem-loop dsi-mir-1005


Accession
MI0011752
Description
Drosophila simulans dsi-mir-1005 precursor miRNA
Gene family
MIPF0000943; mir-1005


Sequence

uucacggccaugaugccuaccauucugaccuGUGAGUUGAUCGAUUUCGAGUUuuuggccacaaauauaaUCUGGAAUCUUUAAUUCGCAGuucccaccgaaaugucaguguucgugagg
(((((((.((((((............((.(((((((((((..((((((((...((((....)))).....)).)))))).))))))))))).))..........)))).)).))))))).

Structure
-       c  -    gccuaccauucu  c           UC      -  --GUU    g 
 uucacgg ca ugau            ga cuGUGAGUUGA  GAUUUC GA     uuug c
 ||||||| || ||||            || |||||||||||  |||||| ||     ||||  
 gagugcu gu acug            cu GACGCUUAAUU  CUAAGG CU     aaac c
g       u  g    --uaaagccacc  u           -U      U  aauau    a 


Annotation confidence Not enough data
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Genome context
chr2L: 4265528-4265647 [+]

Database links

Mature dsi-miR-1005-5p

Accession MIMAT0012467
Description Drosophila simulans dsi-miR-1005-5p mature miRNA
Sequence 32 - GUGAGUUGAUCGAUUUCGAGUU - 53
Evidence experimental
Illumina [1]

Mature dsi-miR-1005-3p

Accession MIMAT0012468
Description Drosophila simulans dsi-miR-1005-3p mature miRNA
Sequence 71 - UCUGGAAUCUUUAAUUCGCAG - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9