Stem-loop sequence mtr-MIR2586a

Accession

MI0011798 (change log)

Previous IDs

mtr-MIR2586

Description

Medicago truncatula miR2586 stem-loop

Stem-loop

   ------------------------------------augacaaccuaugaagcacggauacggacacggac    g   c     a     ----gccg    aacua     u   a 
5'                                                                        accg aca gacac gacac        acac     auaau uga a
                                                                          |||| ||| ||||| |||||        ||||     ||||| ||| a
3'                                                                        uggc ugu cugug cugug        ugug     uauua acu u
   aacaguagauacuucgugccugugaggagccuaauccgcacagggucacagccugugcacagcacaggcua    -   a     g     aacauuaa    --guc     c   a 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (JCVI_Mt3.5.2): chr2: 20061144-20061339 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0011798

Mature sequence mtr-miR2586a

• Accession: MIMAT0013251
• Previous IDs: mtr-miR2586
• Sequence: 167 - cgaggaguguccgugcuucau - 187
• Evidence: experimental; 454 [1]

References

1. PMID:19767456 "Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules" Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M Plant Cell. 21:2780-2796(2009).