miRBase entry: mtr-MIR2587b

Stem-loop mtr-MIR2587b


Accession
MI0011800
Description
Medicago truncatula mtr-MIR2587b precursor miRNA
Gene family
MIPF0000835; MIR2587


Sequence

aggugucauggucauugUUGACCGUUCAUAUGAACCCUGcaauaacauugcaacuugugugggguucauauaacggucaacugagaccuuugacauca
.(((((((.((((...((((((((((.(((((((((((((....(((........))))))))))))))))))))))))))...))))..))))))).

Structure
a       -u    auu          C             aaua   uug 
 gguguca  gguc   gUUGACCGUU AUAUGAACCCUGc    aca   c
 |||||||  ||||   |||||||||| |||||||||||||    |||    
 cuacagu  ccag   caacuggcaa uauacuuggggug    ugu   a
a       uu    agu          -             ----   uca 


Annotation confidence Not enough data
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Genome context
chr5: 36871746-36871843 [-]

Database links

Mature mtr-miR2587b

Accession MIMAT0013253
Description Medicago truncatula mtr-miR2587b mature miRNA
Sequence 18 - UUGACCGUUCAUAUGAACCCUG - 39
Evidence experimental
454 [1]

References

  1. PubMed ID: 19767456
    Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
    "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
    "Plant Cell (2009) 21:2780-2796