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miRBase |
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Stem-loop sequence mtr-MIR2592d |
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Accession | MI0011817 (change log) | |||||
Description | Medicago truncatula miR2592d stem-loop | |||||
Gene family | MIPF0000815; MIR2592 | |||||
Literature search |
1 open access papers mention mtr-MIR2592d | |||||
Stem-loop |
a - c - cu u uau - g a - -a a 5' gguaa uucaaacuugu aaacaacaggacucaagcauuucgc aagcgccucauguuu ccuuugaaaaua uaaauuuuugu gcu g uuuagauga ggua uuaaguguca ggauug a ||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||| ||| | ||||||||| |||| |||||||||| |||||| c 3' cuauu aaguuuggacg uuuguuguccugaguucguaaagcg uuuguggaguacaaa ggaaacuuuuau auuuaaaaaca cga c aaaucuacu ccau aguucacggu cuuaac c - u u g ag u cuc a g a g gg u |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence mtr-miR2592d-5p |
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Accession | MIMAT0020941 |
Previous IDs | mtr-miR2592d* |
Sequence |
22 - caacaggacucaagcauuucgc - 43 |
Evidence | experimental; Illumina [2] |
Mature sequence mtr-miR2592d-3p |
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Accession | MIMAT0013270 |
Previous IDs | mtr-miR2592d |
Sequence |
216 - aaaugcuugaguccuguuguu - 236 |
Evidence | experimental; 454 [1], Illumina [2] |
References |
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1 |
PMID:19767456
"Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules"
Plant Cell. 21:2780-2796(2009).
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2 |
PMID:21571671
"Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis"
Plant Physiol. 156:1990-2010(2011).
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