Stem-loop sequence mtr-MIR2593c

Accession

MI0011829 (change log)

Description

Medicago truncatula miR2593c stem-loop

Gene family

MIPF0000875; MIR2593

Stem-loop

   u            u   c       a                  caca      uu 
5'  uauaagcaaaag uua auuuuag uucauucauuuaaugaug    uggucu  a
    |||||||||||| ||| ||||||| ||||||||||||||||||    ||||||  u
3'  auauucguuuuu gau uaagauc aaguaaguaaauuacuac    accaga  u
   u            u   a       c                  auac      ua 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (JCVI_Mt3.5.2): chr3: 27953809-27953923 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0011829

Mature sequence mtr-miR2593c

• Accession: MIMAT0013282
• Sequence: 77 - uuaaaugaaugaaccuagaau - 97
• Evidence: experimental; 454 [1]

References

1. PMID:19767456 "Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules" Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M Plant Cell. 21:2780-2796(2009).