Stem-loop sequence mtr-MIR2595

Accession

MI0011832 (change log)

Description

Medicago truncatula miR2595 stem-loop

Stem-loop

   aguu         -a                 u        u         caguucuaauuuuauagcu 
5'     uuugcaauu  uaaaagagauauagaga gagaaugu acaagucug                   a
       |||||||||  ||||||||||||||||| |||||||| |||||||||                   g
3'     ggacguuaa  auuuucucuguauuucu cuuuuaca uguuuagac                   u
   --gc         aa                 u        u         auucagacaauaccuguuc 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (JCVI_Mt3.5.2): chr7: 10658083-10658222 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0011832

Mature sequence mtr-miR2595

• Accession: MIMAT0013285
• Sequence: 101 - uacauuuucuucuuuaugucu - 121
• Evidence: experimental; 454 [1]

References

1. PMID:19767456 "Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules" Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M Plant Cell. 21:2780-2796(2009).