miRBase entry: mtr-MIR2600a

Stem-loop mtr-MIR2600a


Accession
MI0011850
Description
Medicago truncatula mtr-MIR2600a precursor miRNA
Gene family
MIPF0001284; MIR2600


Sequence

cggguacaccuuuuugggugACAUUAGCCAAUCACAAUGCCacaaugcuugugaaagagagagaaacacaaacauuguggcauugugauuggccaaugucacccagguauucu
.((((((......((((((((((((.(((((((((((((((((((((.(((((.............))))).))))))))))))))))))))).)))))))))))))))))).

Structure
c      accuuu            A                     c     aaaga 
 ggguac      uugggugACAUU GCCAAUCACAAUGCCacaaug uugug     g
 ||||||      |||||||||||| ||||||||||||||||||||| |||||     a
 cuuaug      gacccacuguaa cgguuaguguuacgguguuac aacac     g
u      ------            c                     a     aaaga 


Annotation confidence Not enough data
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Genome context
chr7: 6096933-6097045 [+]

Database links

Mature mtr-miR2600a

Accession MIMAT0013303
Description Medicago truncatula mtr-miR2600a mature miRNA
Sequence 21 - ACAUUAGCCAAUCACAAUGCC - 41
Evidence experimental
454 [1]

References

  1. PubMed ID: 19767456
    Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
    "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
    "Plant Cell (2009) 21:2780-2796