Stem-loop sequence mtr-MIR2612

Accession

MI0011872 (change log)

Description

Medicago truncatula miR2612 stem-loop

Stem-loop

   a    c   a                        g    g     c            uacacaa 
5'  uaag ucu ucauguauuugauagugucaacua uaca aaaac uaucuaucuagc       u
    |||| ||| |||||||||||||||||||||||| |||| ||||| ||||||||||||        
3'  guuc aga aguacauaaacuauuacaguugau augu uuuug auagauagauug       c
   a    a   a                        g    a     a            uauaaaa 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (JCVI_Mt3.5.2): chr4: 24076464-24076595 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0011872

Mature sequence mtr-miR2612

• Accession: MIMAT0013325
• Sequence: 20 - ugauagugucaacuaguacag - 40
• Evidence: experimental; 454 [1]

References

1. PMID:19767456 "Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules" Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M Plant Cell. 21:2780-2796(2009).