Stem-loop mtr-MIR2613

Accession

MI0011874

Description

Medicago truncatula mtr-MIR2613 precursor miRNA

Sequence

aaucgaucugagaagaagguugauuggcggcgguggugguggugugaauacaguuaugaggagaaaaaugguuguuuuuaucggaggaugguggugaacggagaucagcgaCGGUCGCCGGUGGUCAAUGGUcggaaagaagagcggug
.((((.(((.....((..((((((((.(((((((.((.(((((.(...(((..((((...((.((((((....)))))).)).....))))..))).....).)))).).)).))))))).))))))))..)).......))).)))).

Structure

a    a   --gagaa  ag        g       g  g -    g --gaa   ag    --gag  g      g 
 aucg ucu       ga  guugauug cggcggu gu g uggu u     uac  uuau     ga aaaaau g
 |||| |||       ||  |||||||| ||||||| || | |||| |     |||  ||||     || ||||||  
 uggc aga       cU  UAACUGGU GCCGCUG Ca c acua a     gug  ggua     cu uuuuug u
g    g   agaaagg  GG        G       G  g g    g ggcaa   gu    ggagg  a      u 

Annotation confidence Not enough data

Genome context

chr5: 9706906-9707054 [-]

Mature mtr-miR2613

• Accession: MIMAT0013327
• Description: Medicago truncatula mtr-miR2613 mature miRNA
• Sequence: 112 - CGGUCGCCGGUGGUCAAUGGU - 132
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796