Stem-loop mtr-MIR2632b

Accession

MI0011944

Description

Medicago truncatula mtr-MIR2632b precursor miRNA

Gene family

MIPF0001203; MIR2632

Sequence

aagucauuugaauuuucaucCCUGAAGUUACUAAUCCUUCCAaucugccccugcaaauauuaaucauuugacuuuugguaaugacagcccaccucagcaaaaaaaccuaauuaugaccaaaaguuaaaugauuaauauuugcagggcagauuagaaggauuaguaacuucagagacgaaaauucaaaugaacua
.((((((((((((((((.((.(((((((((((((((((((.(((((((((.((((((((((((((((((((((((((((.((((..........................)))).))))))))))))))))))))))))))))))))))))).))))))))))))))))))).)).))))))))))))).))).

Structure

a   -             a  C                   C         c                            a    cagcccaccuca 
 agu cauuugaauuuuc uc CUGAAGUUACUAAUCCUUC Aaucugccc ugcaaauauuaaucauuugacuuuuggu auga            g
 ||| ||||||||||||| || ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||             
 uca guaaacuuaaaag ag gacuucaaugauuaggaag uuagacggg acguuuauaauuaguaaauugaaaacca uauu            c
a   a             c  a                   a         -                            g    aauccaaaaaaa 

Annotation confidence Not enough data

Genome context

chr6: 12646949-12647142 [-]

Mature mtr-miR2632b

• Accession: MIMAT0013397
• Description: Medicago truncatula mtr-miR2632b mature miRNA
• Sequence: 21 - CCUGAAGUUACUAAUCCUUCCA - 42
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796