Stem-loop sequence mtr-MIR2633

Accession

MI0011946 (change log)

Description

Medicago truncatula miR2633 stem-loop

Stem-loop

   u   c     aau       u     u  u        g    cu u     -      u 
5'  uga uaaac   guuaugu agucu ga caaagugu aucu  g agucc cuaacu c
    ||| |||||   ||||||| ||||| || |||||||| ||||  | ||||| |||||| u
3'  acu auuug   caauaca uuaga cu guuuuaca uaga  c uuagg gauugg a
   u   u     ---       c     c  c        g    au -     c      a 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (JCVI_Mt3.5.2): chr5: 25828393-25828510 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0011946

Mature sequence mtr-miR2633

• Accession: MIMAT0013399
• Sequence: 82 - ugacauuuugcuccagauuca - 102
• Evidence: experimental; 454 [1]

References

1. PMID:19767456 "Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules" Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M Plant Cell. 21:2780-2796(2009).