Stem-loop sequence mtr-MIR2639

Accession

MI0011953 (change log)

Description

Medicago truncatula miR2639 stem-loop

Stem-loop

   c  a   ugaauu          -  ac    uu        g     a 
5'  ag ccu      uaucaaggug ug  aguc  acugaauu ccaau c
    || |||      |||||||||| ||  ||||  |||||||| |||||  
3'  uc ggg      auaguuccac gc  ucgg  ugauuuaa gguua a
   a  a   -ugaau          u  au    -c        a     u 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (JCVI_Mt3.5.2): chr3: 10235233-10235329 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0011953

Mature sequence mtr-miR2639

• Accession: MIMAT0013406
• Sequence: 62 - uagucggcuuacgucaccuug - 82
• Evidence: experimental; 454 [1]

References

1. PMID:19767456 "Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules" Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M Plant Cell. 21:2780-2796(2009).