Stem-loop mtr-MIR2655b

Accession

MI0011988

Description

Medicago truncatula mtr-MIR2655b precursor miRNA

Gene family

MIPF0000813; MIR2655

Sequence

cCGUUUUGGUCCCUUAACUUUAuugaaaguaucgguuugguccuuucuguuaauuuaauucaaaaaaacguuaaauuuugaucccuuaucuuauuuaauuaguauuaguuuggucccuuaacuuauuuaauuaguauuaguuuggucccuaaacuuaacguuuuuuugaauuaaauuaacauaaagaucaaaccgauacuuuaaauaaaguuaagggaccuaaac
..((((.(((((((((((((((((.(((((((((((((((((.(((.(((((((((((((((((((((((((((.(((.((((.............((((((((((((((..................)))))))))))))).))))...))).))))))))))))))))))))))))))).)))))))))))))))))))).))))))))))))))))).))))

Structure

cC    U                 g                 c   c                           a   --u    ccuuaucuuauuu              uggucccu 
  GUUU GGUCCCUUAACUUUAuu aaaguaucgguuugguc uuu uguuaauuuaauucaaaaaaacguuaa uuu   gauc             aauuaguauuaguu        u
  |||| ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||| |||   ||||             ||||||||||||||         
  caaa ccagggaauugaaauaa uuucauagccaaacuag aaa acaauuaaauuaaguuuuuuugcaauu aaa   cugg             uugauuaugauuaa        a
--    u                 a                 -   u                           c   ucc    ------------u              uuuauuca 

Annotation confidence Not enough data

Genome context

chr7: 18275180-18275404 [+]

Mature mtr-miR2655b

• Accession: MIMAT0013441
• Description: Medicago truncatula mtr-miR2655b mature miRNA
• Sequence: 2 - CGUUUUGGUCCCUUAACUUUA - 22
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796