Stem-loop mtr-MIR2655g

Accession

MI0011993

Description

Medicago truncatula mtr-MIR2655g precursor miRNA

Gene family

MIPF0000813; MIR2655

Sequence

cucauaaguaauaaaaagucCGUUUAGGUCCCUUAACUUUAuuuaaaguaucgguuuaguccuuuauguuaauuuaauucaaaaaaacguuaaguuuagggaccaaacuaauacuaauuaaauaaguuaagggaccaaacuaauacuaauuaaauaaguuaagagaccaaaauuuaacguauuuuuaauuaaauuaacagaagggaccaaacuguuacuuuaaauaaaguuaagggaucaaaacggaccuuuuauuacuuaaggga
(((.((((((((((((.((((((((.((((((((((((((((((((((((.((((((.(((((((.(((((((((((((.(((((.(((((((((((.((.....((((.....((((((....((((.........)))).....))))))....))))......)).))))))))))).)))))))))))))))))).))))))).)))))).)))))))))))))))))))))))).)))))))).)))))))))))).))).

Structure

-   a            a        A                        u      a       a             c     a           a  -gacca    aauac      -aaua    aag 
 cuc uaaguaauaaaa gucCGUUU GGUCCCUUAACUUUAuuuaaagua cgguuu guccuuu uguuaauuuaauu aaaaa acguuaaguuu gg      aacu     uaauua     aguu   g
 ||| |||||||||||| |||||||| |||||||||||||||||||||||| |||||| ||||||| ||||||||||||| ||||| ||||||||||| ||      ||||     ||||||     ||||   g
 ggg auucauuauuuu caggcaaa cuagggaauugaaauaaauuucau gucaaa cagggaa acaauuaaauuaa uuuuu ugcaauuuaaa cc      uuga     auuaau     ucaa   a
a   a            c        a                        u      c       g             -     a           a  agagaa    -auaa      cauaa    acc 

Annotation confidence Not enough data

Genome context

chr3: 35510189-35510454 [-]

Mature mtr-miR2655g

• Accession: MIMAT0013446
• Description: Medicago truncatula mtr-miR2655g mature miRNA
• Sequence: 21 - CGUUUAGGUCCCUUAACUUUA - 41
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796