Stem-loop mtr-MIR2658

Accession

MI0012006

Description

Medicago truncatula mtr-MIR2658 precursor miRNA

Sequence

aaAUGUGACCUUGUAUAUGAUCuggaaggagagaaauauuugauauaagauuuuaaaauuauuauuggucuguucaaccacuccuuaaccaaaucaaaauguuuguuugcauua
.(((((((.(.......((((.(((((((((........((((....(((((..............)))))..))))...))))))..))).))))........).))))))).

Structure

a       C -UUGUAUA    C   --      agaaauau    uaua     uuaaaa 
 aAUGUGA C        UGAU ugg  aaggag        uuga    agauu      u
 ||||||| |        |||| |||  ||||||        ||||    |||||       
 uuacguu g        acua acc  uuccuc        aacu    ucugg      u
a       u uuuguaaa    a   aa      -----acc    --ug     uuauua 

Annotation confidence Not enough data

Genome context

chr5: 40662275-40662388 [-]

Mature mtr-miR2658

• Accession: MIMAT0013459
• Description: Medicago truncatula mtr-miR2658 mature miRNA
• Sequence: 3 - AUGUGACCUUGUAUAUGAUC - 22
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796