Stem-loop sequence mtr-MIR2660

Accession

MI0012013 (change log)

Description

Medicago truncatula miR2660 stem-loop

Stem-loop

   a      c  c               uuuc 
5'  guaaga au agcuauaagcuaguu    a
    |||||| || |||||||||||||||    g
3'  cauuuu ua ucgauauucgaucga    c
   c      -  u               cuuu 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (JCVI_Mt3.5.2): chr4: 9445467-9445528 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0012013

Mature sequence mtr-miR2660

• Accession: MIMAT0013466
• Sequence: 3 - uaagacaucagcuauaagcua - 23
• Evidence: experimental; 454 [1]

References

1. PMID:19767456 "Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules" Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M Plant Cell. 21:2780-2796(2009).