Stem-loop sequence mtr-MIR2671b

Accession MI0012031
Description Medicago truncatula miR2671b stem-loop
Gene family MIPF0000813; MIR2655
Stem-loop 
-                                   c      a            g      c                                      c                                              -auu  a         c   acucuaauac 
 ucguuuuggucccuuaacuauuaaaaguuucguuu gguccc uaauuuauuuuu gguuuu uuuuggucccuuaacuauuaaaaguuucguuuuggucc uuaacuuauuuuuugguuucguuuuggucccuuaacuuauuuuuug    uc uuuuggucc uua          a
 ||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    || ||||||||| |||          u
 agcaaaaccagggaauugauaauuuucaaagcaaa ccaggg auugaaugaaaa ccaaaa aaaaccggggaauugauaauuuucgaagcaaaaccagg aauugaaugaaaagccaaagcaaaaccagggaauugaguaggaggc    gg gaaaucagg aau          u
a                                   a      a            a      c                                      c                                              aguu  g         a   acaauccuac
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Genome context
Coordinates (Mt3.0) Overlapping transcripts
MtChr4: 31627044-31627402 [-]
intergenic

Mature sequence mtr-miR2671b

Accession MIMAT0013484
Sequence

21 -  

uuaaaaguuucguuucggucc

 - 41

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Evidence experimental; 454 [1]

References

1
PMID:19767456 "Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules" Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M Plant Cell. 21:2780-2796(2009).