Stem-loop sequence mtr-MIR2671e

AccessionMI0012034 (change log)
DescriptionMedicago truncatula miR2671e stem-loop
Gene family MIPF0000813; MIR2655
   ---------------------------------                              c      a            g      c                            a         c                                             u   --  a         c   acucuaauac 
5'                                  uuggucccuuaacuauuaaaaguuucguuu gguccc uaacuuauuuuu gguuuu uuuuggucccuuaacuauuaaaaguuuc uuuuggucc uugacuuauuuuuugguuucguuuuggucucuuaacuuauuuuuu guu  uc uuuuggucc uua          a
                                    |||||||||||||||||||||||||||||| |||||| |||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||  || ||||||||| |||          u
3'                                  aaccagggaauugauaauuuucaaagcaaa ccaggg auugaaugaaaa ccaaag aaaaccagggaauugauaauuuucgaag aaaaccagg aauugaaugaaaaaccaaagcaaaaccagggaauugaguaggagg cag  gg gaaacuagg aau          u
   aaaaccagggaauugaauaaaaaaucaaagcaa                              a      a            a      c                            c         c                                             -   uu  a         a   acaauccuac 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (JCVI_Mt3.5.2) Overlapping transcripts
chr5: 41342486-41342866 [+]
Database links

Mature sequence mtr-miR2671e

Accession MIMAT0013487

16 - 


 - 36

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Evidence experimental; 454 [1]


PMID:19767456 "Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules" Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M Plant Cell. 21:2780-2796(2009).