Stem-loop sequence mtr-MIR2674

Accession

MI0012042 (change log)

Description

Medicago truncatula miR2674 stem-loop

Stem-loop

   ---------------------------------------------------------------------------------------------------------------------------------------aauuagaagcucuggcuggaaaacacgaauggu      g  -  ag   a  cau   ca   -    g    aaag  u 
5'                                                                                                                                                                         uuaauc cu ca  ucg au   cau  caa cucg gaca    gu g
                                                                                                                                                                           |||||| || ||  ||| ||   |||  ||| |||| ||||    || c
3'                                                                                                                                                                         aguugg ga gu  agu ua   gua  guu gggu cugu    ca u
   auaaucuuuucacucuuggguacugaagguuucgcucaccuacuggucuccguauacaauguugugcaagauuuuguacguaaaaaagacaacuuuguaaaaacaucgaaccugauuuaaguagaaauuuucgaaaggaagauugguugagucgucguagauacagua      g  a  gg   a  aau   -a   a    a    ---a  a 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (JCVI_Mt3.5.2): chr6: 17900754-17901047 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0012042

Mature sequence mtr-miR2674

• Accession: MIMAT0013495
• Sequence: 256 - cacucgcuuuggaagucaugg - 276
• Evidence: experimental; 454 [1]

References

1. PMID:19767456 "Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules" Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M Plant Cell. 21:2780-2796(2009).