Stem-loop sequence mtr-MIR2676b

Accession

MI0012046 (change log)

Description

Medicago truncatula miR2676b stem-loop

Gene family

MIPF0000831; MIR2676

Stem-loop

   c   ug   g  u   aa  ug  ga   u  a   ug      a     ---         -u    aag       -uagagaau       g    cu 
5'  cau  uuu ga aau  uu  aa  auu uc aaa  auggaa uuuau   gaaguauuu  guuc   uuaaaau         uucaaau acac  a
    |||  ||| || |||  ||  ||  ||| || |||  |||||| |||||   |||||||||  ||||   |||||||         ||||||| ||||   
3'  gua  aaa cu uua  aa  uu  uaa ag uuu  uaccuu aagua   uuucauaaa  uaag   aguuuug         agguuug ugug  a
   -   gu   a  u   ag  gu  aa   u  g   gu      -     gaa         cu    -gg       uaaguaagu       -    aa 

Confidence

Annotation confidence: not enough data

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Database links

• miRBase Tracker:MI0012046

Mature sequence mtr-miR2676b

• Accession: MIMAT0013499
• Sequence: 156 - cauuguuuggauaauaauuug - 176
• Evidence: experimental; 454 [1]

References

1. PMID:19767456 "Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules" Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M Plant Cell. 21:2780-2796(2009).