miRBase entry: aqc-MIR166d

Stem-loop aqc-MIR166d


Accession
MI0012077
Description
Aquilegia caerulea aqc-MIR166d precursor miRNA
Gene family
MIPF0000004; MIR166


Sequence

gaguggaauggaguugguguguguggcuagcuaccugcugguagagauguuaggaggaauguuguuuggcucgaagcuuuagaaccuuuuguguucaaugcauaUCGGACCAGGCUUCAUUCCUCucaa
(((.((((((((((((((.((((((((((((.....))))))...((...(((((((..((..((((......))))..))...)))))))...))....)))).)).)))).)))))))))).)))..

Structure
--   u          -    g  -    gcuagcuaccugcugguaga  ugu       -aa  uu    gg 
  gag ggaauggagu uggu ug ugug                    ga   uaggagg   ug  guuu  c
  ||| |||||||||| |||| || ||||                    ||   |||||||   ||  ||||   
  cuC CCUUACUUCG ACCA GC auac                    cu   guuuucc   au  cgaa  u
aa   U          G    G  U    ----------------guaa  ugu       aag  uu    gc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature aqc-miR166d

Accession MIMAT0012559
Description Aquilegia caerulea aqc-miR166d mature miRNA
Sequence 105 - UCGGACCAGGCUUCAUUCCUC - 125
Evidence not_experimental

References

  1. PubMed ID: 19699282
    Identification of conserved Aquilegia coerulea microRNAs and their targets
    "Puzey JR, Kramer EM"
    "Gene (2009) 448:46-56