Stem-loop aqc-MIR169a

Accession

MI0012081

Description

Aquilegia caerulea aqc-MIR169a precursor miRNA

Gene family

MIPF0000012; MIR169_1

Sequence

gcaugaaaguaggaggcguguuuagUAGCCAAGGAUGACUUGCCUAccaagggucucauuuuaaggcauuaucuuccuuggauaaugcgucuggaauccucgacugguuaauaggcagucuccuuggccaacuugacugccuccuauuacucaugcua
((((((.(((((((((((.(((.(((.((((((((.((((.(((((((((((((.(((.....(.(((((((((.....))))))))).).))).)))))....))))....))))))))))))))))..))).))))))))))))))..))))))..

Structure

--      -a           u   u   -A        U    U    ----    ----     c   uuuua g         u 
  gcauga  aguaggaggcg guu agU  GCCAAGGA GACU GCCU    Acca    agggu uca     a gcauuaucu c
  ||||||  ||||||||||| ||| |||  |||||||| |||| ||||    ||||    ||||| |||     | ||||||||| c
  cguacu  uuauccuccgu cag uca  cgguuccu cuga cgga    uggu    uccua ggu     u cguaauagg u
au      ca           -   u   ac        -    -    uaau    cagc     a   ----c g         u 

Annotation confidence Not enough data

Genome context

Unknown

Mature aqc-miR169a

• Accession: MIMAT0012563
• Description: Aquilegia caerulea aqc-miR169a mature miRNA
• Sequence: 26 - UAGCCAAGGAUGACUUGCCUA - 46
• Evidence: not_experimental

References

1. PubMed ID: 19699282
   Identification of conserved Aquilegia coerulea microRNAs and their targets
   "Puzey JR, Kramer EM"
   "Gene (2009) 448:46-56