miRBase entry: aqc-MIR172a

Stem-loop aqc-MIR172a


Accession
MI0012089
Description
Aquilegia caerulea aqc-MIR172a precursor miRNA
Gene family
MIPF0000035; MIR172


Sequence

guuggcucuuuggagacgcagcaucaucuaguucgcacaugaugaugauaggcagugauuaagucacucacuuacgcaugauagaaguugugauaugAGAAUCUUGAUGAUGCUGCAUcagcaguuaggcgacua
((((.((..(((..((.(((((((((((.(((((.((.((.(((((........(((..(((((.....)))))..))).......))))).)).)).))).)).))))))))))).))..)))..)).))))..

Structure
--    g  cu   ga  c           u  -   g  c  g     gauaggca   au     c 
  guug cu  uug  ga gcagcaucauc ag uuc ca au augau        gug  uaagu a
  |||| ||  |||  || ||||||||||| || ||| || || |||||        |||  ||||| c
  cagc ga  gac  cU CGUCGUAGUAG UC AAG gu ua uguug        uac  auuca u
au    g  uu   ga  A           U  U   A  a  g     -aagauag   gc     c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature aqc-miR172a

Accession MIMAT0012571
Description Aquilegia caerulea aqc-miR172a mature miRNA
Sequence 98 - AGAAUCUUGAUGAUGCUGCAU - 118
Evidence not_experimental

References

  1. PubMed ID: 19699282
    Identification of conserved Aquilegia coerulea microRNAs and their targets
    "Puzey JR, Kramer EM"
    "Gene (2009) 448:46-56