Stem-loop aqc-MIR396a

Accession

MI0012094

Description

Aquilegia caerulea aqc-MIR396a precursor miRNA

Gene family

MIPF0000047; MIR396

Sequence

UUCCACAGCUUUCUUGAACUGcaugguaaucuaaucuaauacagauaaaauuaagcuuguucuucaaguacauggugccauggugguauaucgccuuugcgguucaauaaagcugugggaaa
((((((((((((.((((((((((.(((......((((.....))))........(((((.....))))).....((((((...))))))...)))..)))))))))).))))))))))))..

Structure

--            C          -u   aaucuaaucuaauacagauaaaauuaagcuuguucuucaaguacaug      u 
  UUCCACAGCUUU UUGAACUGca  ggu                                               gugcca  
  |||||||||||| ||||||||||  |||                                               |||||| g
  agggugucgaaa aacuuggcgu  ccg                                               uauggu  
aa            u          uu   --------------------------------------------cua      g 

Annotation confidence Not enough data

Genome context

Unknown

Mature aqc-miR396a

• Accession: MIMAT0012576
• Description: Aquilegia caerulea aqc-miR396a mature miRNA
• Sequence: 1 - UUCCACAGCUUUCUUGAACUG - 21
• Evidence: not_experimental

References

1. PubMed ID: 19699282
   Identification of conserved Aquilegia coerulea microRNAs and their targets
   "Puzey JR, Kramer EM"
   "Gene (2009) 448:46-56