miRBase entry: cte-mir-2685

Stem-loop cte-mir-2685


Accession
MI0012118
Description
Capitella teleta cte-mir-2685 precursor miRNA


Sequence

gcuugcgaauCUUGUGAUCUUUCGAGGGUUGUAguugacguguuuugguuuuaUAACUCAGUAAGAUCACAGGCCuugcauuu
...(((((..(((((((((((.(..(((((((((..(((........)))))))))))).).)))))))))))..)))))...

Structure
gcu     au           U GA         uu   gug 
   ugcga  CUUGUGAUCUU C  GGGUUGUAg  gac   u
   |||||  ||||||||||| |  |||||||||  |||    
   acguu  GGACACUAGAA G  CUCAAUauu  uug   u
uuu     CC           U -A         --   guu 


Annotation confidence Not enough data
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Genome context
KB310891.1: 8755-8837 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cte-mir-2685
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cte-miR-2685-5p

Accession MIMAT0013532
Description Capitella teleta cte-miR-2685-5p mature miRNA
Sequence 11 - CUUGUGAUCUUUCGAGGGUUGUA - 33
Evidence experimental
454 [1]

Mature cte-miR-2685-3p

Accession MIMAT0013533
Description Capitella teleta cte-miR-2685-3p mature miRNA
Sequence 54 - UAACUCAGUAAGAUCACAGGCC - 75
Evidence experimental
454 [1]

References

  1. PubMed ID: 19755470
    MicroRNAs resolve an apparent conflict between annelid systematics and their fossil record
    "Sperling EA, Vinther J, Moy VN, Wheeler BM, Semon M, Briggs DE, Peterson KJ"
    "Proc Biol Sci (2009) 276:4315-4322