miRBase entry: cte-mir-1990b

Stem-loop cte-mir-1990b


Accession
MI0012129
Description
Capitella teleta cte-mir-1990b precursor miRNA


Sequence

cucugcucacacagugucUAAGUUGACGUAGUCCCAGGGUuuucacaaucuauucaagacuugugguuacgucagcuuugccauuguugggcacug
...((((((.((((((.(.((((((((((((.((..(((((((............)))))))..)))))))))))))).).))))))))))))...

Structure
cuc      c      u U            U  CA       cacaa 
   ugcuca acagug c AAGUUGACGUAG CC  GGGUuuu     u
   |||||| |||||| | |||||||||||| ||  |||||||      
   acgggu uguuac g uucgacugcauu gg  uucagaa     c
guc      -      c u            -  ug       cuuau 


Annotation confidence Not enough data
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Genome context
KB293180.1: 600032-600127 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from cte-mir-1990b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cte-miR-1990b

Accession MIMAT0013547
Description Capitella teleta cte-miR-1990b mature miRNA
Sequence 19 - UAAGUUGACGUAGUCCCAGGGU - 40
Evidence experimental
454 [1]

References

  1. PubMed ID: 19755470
    MicroRNAs resolve an apparent conflict between annelid systematics and their fossil record
    "Sperling EA, Vinther J, Moy VN, Wheeler BM, Semon M, Briggs DE, Peterson KJ"
    "Proc Biol Sci (2009) 276:4315-4322