Stem-loop cte-mir-1990c

Accession

MI0012130

Description

Capitella teleta cte-mir-1990c precursor miRNA

Gene family

MIPF0000718; mir-1990

Sequence

cgaggcuggaaguuaacguagucccggguugcaucgcuguacuuggcccUGGGACUAUGUCAACUUACAACugcg
((.((.((..((((.((((((((((((((((((....))))....)))).)))))))))).))))..)).)).))

Structure

  a  c  ga    a          -    ----    u 
cg gg ug  aguu acguaguccc gggu    ugca c
|| || ||  |||| |||||||||| ||||    ||||  
gc uC AC  UCAA UGUAUCAGGG cccg    augu g
  g  A  AU    C          U    guuc    c 

Annotation confidence Not enough data

Genome context

KB293180.1: 606805-606879 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from cte-mir-1990c

Mature cte-miR-1990c-3p

• Accession: MIMAT0013548
• Description: Capitella teleta cte-miR-1990c-3p mature miRNA
• Sequence: 50 - UGGGACUAUGUCAACUUACAAC - 71
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755470
   MicroRNAs resolve an apparent conflict between annelid systematics and their fossil record
   "Sperling EA, Vinther J, Moy VN, Wheeler BM, Semon M, Briggs DE, Peterson KJ"
   "Proc Biol Sci (2009) 276:4315-4322