miRBase entry: cte-mir-2720

Stem-loop cte-mir-2720


Accession
MI0012136
Description
Capitella teleta cte-mir-2720 precursor miRNA


Sequence

cugacugccugucuguCUGGGUAAUCGCUCUAGACCAUgugaugucgcaugcugcagcgcucaUGACUAGAGAGUUUACUCAUCCagagaguagucuc
..((((((.(.((((..(((((((.(.((((((..((((.(.(((.(((...))).)))).)))).)))))).).)))))))..)))).)))))))..

Structure
cu      c g    uC       U G      AC    u a   c   u 
  gacugc u ucug  UGGGUAA C CUCUAG  CAUg g ugu gca  
  |||||| | ||||  ||||||| | ||||||  |||| | ||| ||| g
  cugaug a agaC  ACUCAUU G GAGAUC  GUac c gcg cgu  
cu      - g    CU       U A      -A    u -   a   c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KB305766.1: 146207-146304 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cte-mir-2720
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cte-miR-2720-5p

Accession MIMAT0013554
Description Capitella teleta cte-miR-2720-5p mature miRNA
Sequence 17 - CUGGGUAAUCGCUCUAGACCAU - 38
Evidence experimental
454 [1]

Mature cte-miR-2720-3p

Accession MIMAT0013555
Description Capitella teleta cte-miR-2720-3p mature miRNA
Sequence 64 - UGACUAGAGAGUUUACUCAUCC - 85
Evidence experimental
454 [1]

References

  1. PubMed ID: 19755470
    MicroRNAs resolve an apparent conflict between annelid systematics and their fossil record
    "Sperling EA, Vinther J, Moy VN, Wheeler BM, Semon M, Briggs DE, Peterson KJ"
    "Proc Biol Sci (2009) 276:4315-4322