miRBase entry: cte-mir-2709

Stem-loop cte-mir-2709


Accession
MI0012156
Description
Capitella teleta cte-mir-2709 precursor miRNA


Sequence

cucuaaUGUUUGAAUUAGCUGUGAUGUGcuuuaguuugaaguucuuaucacagcuauuuugaucauuuua
....((((.(((((.(((((((((((.((((((...))))))...))))))))))).))))).))))...

Structure
cucu    U     U           --U      g 
    aaUG UUGAA UAGCUGUGAUG   Gcuuua  
    |||| ||||| |||||||||||   |||||| u
    uuac aguuu aucgacacuau   ugaagu  
-auu    u     u           ucu      u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KB311706.1: 29082-29151 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from cte-mir-2709
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cte-miR-2709

Accession MIMAT0013578
Description Capitella teleta cte-miR-2709 mature miRNA
Sequence 7 - UGUUUGAAUUAGCUGUGAUGUG - 28
Evidence experimental
454 [1]

References

  1. PubMed ID: 19755470
    MicroRNAs resolve an apparent conflict between annelid systematics and their fossil record
    "Sperling EA, Vinther J, Moy VN, Wheeler BM, Semon M, Briggs DE, Peterson KJ"
    "Proc Biol Sci (2009) 276:4315-4322