Stem-loop sequence hsv1-mir-H7

Accession

MI0012167 (change log)

Previous IDs

hsv1-miR-H7

Description

Herpes Simplex Virus 1 miR-H7 stem-loop

Gene family

MIPF0000929; mir-H7

Stem-loop

   --             aa       u caa       -   uc 
5'   gaagaggggggag  agggguc g   ccaaagg ugg  u
     |||||||||||||  ||||||| |   ||||||| |||  g
3'   cuucucccuucuu  uccccag c   gguuucc gcc  g
   cu             -c       c cua       u   ug 

Confidence

Annotation confidence: not enough data

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Database links

• miRBase Tracker:MI0012167

Mature sequence hsv1-miR-H7-5p

• Accession: MIMAT0012595
• Previous IDs: hsv1-miR-H7
• Sequence: 14 - aaaggggucugcaaccaaagg - 34
• Evidence: experimental; Illumina [1-2]

Mature sequence hsv1-miR-H7-3p

• Accession: MIMAT0012596
• Previous IDs: hsv1-miR-H7*
• Sequence: 51 - uuuggaucccgaccccucuuc - 71
• Evidence: experimental; Illumina [1]

References

1. PMID:19656888 "Analysis of human alphaherpesvirus microRNA expression in latently infected human trigeminal ganglia" Umbach JL, Nagel MA, Cohrs RJ, Gilden DH, Cullen BR J Virol. 83:10677-10683(2009).
2. PMID:20181707 "Numerous conserved and divergent microRNAs expressed by herpes simplex viruses 1 and 2" Jurak I, Kramer MF, Mellor JC, van Lint AL, Roth FP, Knipe DM, Coen DM J Virol. 84:4659-4672(2010).