Stem-loop hsv1-mir-H7

Accession

MI0012167

Description

Herpes Simplex Virus 1 hsv1-mir-H7 precursor miRNA

Gene family

MIPF0000929; mir-H7

Sequence

gaagaggggggagAAAGGGGUCUGCAACCAAAGGuggucuggguccguccUUUGGAUCCCGACCCCUCUUCuucccucuucuc
(((((((((((((..(((((((.(...((((((((((.......))).)))))))...).))))))).)))))))))))))..

Structure

--             AA       U CAA       -   uc 
  gaagaggggggag  AGGGGUC G   CCAAAGG ugg  u
  |||||||||||||  ||||||| |   ||||||| |||  g
  cuucucccuuCUU  UCCCCAG C   GGUUUcc gcc  g
cu             -C       C CUA       u   ug 

Annotation confidence Not enough data

Genome context

Unknown

Disease association

hsv1-mir-H7 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsv1-miR-H7-5p

• Accession: MIMAT0012595
• Description: Herpes Simplex Virus 1 hsv1-miR-H7-5p mature miRNA
• Sequence: 14 - AAAGGGGUCUGCAACCAAAGG - 34
• Evidence: experimental ; Illumina [1-2]

Mature hsv1-miR-H7-3p

• Accession: MIMAT0012596
• Description: Herpes Simplex Virus 1 hsv1-miR-H7-3p mature miRNA
• Sequence: 51 - UUUGGAUCCCGACCCCUCUUC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20181707
   Numerous conserved and divergent microRNAs expressed by herpes simplex viruses 1 and 2
   "Jurak I, Kramer MF, Mellor JC, van Lint AL, Roth FP, Knipe DM, Coen DM"
   "J Virol (2010) 84:4659-4672


2. PubMed ID: 19656888
   Analysis of human alphaherpesvirus microRNA expression in latently infected human trigeminal ganglia
   "Umbach JL, Nagel MA, Cohrs RJ, Gilden DH, Cullen BR"
   "J Virol (2009) 83:10677-10683