Stem-loop dpu-mir-133

Accession

MI0012221

Description

Daphnia pulex dpu-mir-133 precursor miRNA

Gene family

MIPF0000029; mir-133

Literature search

1 open access papers mention dpu-mir-133
(3 sentences)

Sequence

aaacagagcccugcuuuagcuggcugaauccgggccaaauuguuauucauagagcagcauUUGGUCCCCUUCAACCAGCUGUaguuggcauucugagcaac
...(((((((..(((.(((((((.((((...(((((((((.(((.(((...))).))))))))))))..)))).))))))).))).)))..))))......

Structure

---aaa    --   cu   u       c    ucc         u   a   a 
      caga  gcc  gcu uagcugg ugaa   gggccaaau guu uuc  
      ||||  |||  ||| ||||||| ||||   ||||||||| ||| ||| u
      gucu  cgg  uga GUCGACC ACUU   CCUGGUUua cga gag  
caacga    ua   -u   U       A    -CC         -   c   a 

Annotation confidence Not enough data

Genome context

GL732523.1: 1708478-1708578 [-]

Mature dpu-miR-133

• Accession: MIMAT0012640
• Description: Daphnia pulex dpu-miR-133 mature miRNA
• Sequence: 61 - UUGGUCCCCUUCAACCAGCUGU - 82
• Evidence: not_experimental

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68