miRBase entry: dpu-mir-33

Stem-loop dpu-mir-33


Accession
MI0012243
Description
Daphnia pulex dpu-mir-33 precursor miRNA
Gene family
MIPF0000070; mir-33


Sequence

acacacuggggguagcccguGUGCAUUGUAGUUGCAUUGCACguugucaauucuuuguuucgcgcaaugcuucggcagugcaacucgggaugccaaccgcu
......(((.((((.((((.(((((((((.(..(((((((.((....(((....)))...)).)))))))..).))))))).)).)))).))))..)))..

Structure
acacac   -g    g    u  -       A UU       A  uugu   u 
      ugg  ggua cccg GU GCAUUGU G  GCAUUGC Cg    caa u
      |||  |||| |||| || ||||||| |  ||||||| ||    |||  
      gcc  ccgu gggc ca cgugacg c  cguaacg gc    guu c
----uc   aa    a    u  a       g uu       c  -uuu   u 


Annotation confidence Not enough data
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Genome context
GL732612.1: 265085-265185 [-]

Database links

Mature dpu-miR-33

Accession MIMAT0012662
Description Daphnia pulex dpu-miR-33 mature miRNA
Sequence 21 - GUGCAUUGUAGUUGCAUUGCAC - 42
Evidence not_experimental

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68