miRBase entry: dpu-mir-7

Stem-loop dpu-mir-7


Accession
MI0012247
Description
Daphnia pulex dpu-mir-7 precursor miRNA
Gene family
MIPF0000022; mir-7


Sequence

ggccuccggcuguugugguaUGGAAGACUAGUGAUUUUGUUGUucggcauaaagaccgguaacaaaaaaucucuaguucaccuaccaaggcag
((((...))))(((.(((((.((..((((((.((((((.((((((((........))))..)))))))))).))))))..))))))).)))..

Structure
ggccuccggcu   g     U  AA      U      G    --    cau 
           guu uggua GG  GACUAG GAUUUU UUGU  ucgg   a
           ||| ||||| ||  |||||| |||||| ||||  ||||    
           cgg accau cc  uugauc cuaaaa aaca  ggcc   a
---------ga   a     -  ac      u      -    au    aga 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
GL732712.1: 112541-112633 [-]

Database links

Mature dpu-miR-7

Accession MIMAT0012666
Description Daphnia pulex dpu-miR-7 mature miRNA
Sequence 21 - UGGAAGACUAGUGAUUUUGUUGU - 43
Evidence not_experimental

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68