miRBase entry: isc-mir-285

Stem-loop isc-mir-285


Accession
MI0012275
Description
Ixodes scapularis isc-mir-285 precursor miRNA
Gene family
MIPF0000009; mir-29

Literature search
1 open access papers mention isc-mir-285
(1 sentences)

Sequence

auccaaauccauccuugggucacugaguucguuugguggguagaaguguguccaauucucUAGCACCAUUUGAAUUCAGUUCauccaaagaguucg
...........((.((((((.((((((((((..(((((..((((.(.((.....)).))))).)))))..))))))))))..)))))).)).....

Structure
auccaaaucca  c      -c          uu     gg    a u  g 
           uc uugggu  acugaguucg  uggug  uaga g gu u
           || ||||||  ||||||||||  |||||  |||| | || c
           ag aaccua  UGACUUAAGU  ACCAC  AUcu c ua c
------gcuug  a      CU          UU     -G    - u  a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature isc-miR-285

Accession MIMAT0012695
Description Ixodes scapularis isc-miR-285 mature miRNA
Sequence 61 - UAGCACCAUUUGAAUUCAGUUC - 82
Evidence not_experimental

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68